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Si004835m Si004835m Si016908m Si016908m Si016166m Si016166m Si031449m Si031449m Si020958m Si020958m Si032841m Si032841m Si013894m Si013894m Si013709m Si013709m Si003826m Si003826m Si006243m Si006243m Si010167m Si010167m
"Si013894m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si013894mUncharacterized protein (392 aa)    
Predicted Functional Partners:
Si016166m
Uncharacterized protein (1081 aa)
     
  0.982
Si020958m
Uncharacterized protein (1629 aa)
     
  0.809
Si016908m
Uncharacterized protein (522 aa)
       
  0.769
Si013709m
Histone deacetylase (458 aa)
       
  0.769
Si010167m
Histone deacetylase (430 aa)
       
  0.769
Si006243m
Histone deacetylase (518 aa)
       
  0.769
Si004835m
Uncharacterized protein (466 aa)
       
  0.769
Si003826m
Histone deacetylase (410 aa)
       
  0.769
Si032841m
Uncharacterized protein (136 aa)
       
  0.745
Si031449m
Uncharacterized protein (141 aa)
       
  0.745
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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