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Si005742m Si005742m Si000133m Si000133m Si014136m Si014136m Si010200m Si010200m Si021050m Si021050m Si026355m Si026355m
"Si014136m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si014136mUncharacterized protein (307 aa)    
Predicted Functional Partners:
Si026355m
Uncharacterized protein (452 aa)
 
   
  0.536
Si010200m
Uncharacterized protein (422 aa)
 
   
  0.495
Si021050m
Cellulose synthase (1077 aa)
     
   
  0.426
Si005742m
Cellulose synthase (1077 aa)
     
   
  0.426
Si000133m
Cellulose synthase (1075 aa)
     
   
  0.426
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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