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Si012741m Si012741m Si014138m Si014138m Si011965m Si011965m Si023722m Si023722m Si018773m Si018773m
"Si014138m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si014138mUncharacterized protein (307 aa)    
Predicted Functional Partners:
Si023722m
Transcription initiation factor IIA subunit 2 ; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation (106 aa)
           
  0.553
Si012741m
Uncharacterized protein (1443 aa)
           
  0.461
Si011965m
Uncharacterized protein (900 aa)
           
  0.461
Si018773m
Transcription initiation factor IIA subunit 2 ; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation (109 aa)
           
  0.422
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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