Full Link:
STRINGSTRING
Si033774m Si033774m Si021485m Si021485m Si037804m Si037804m Si023318m Si023318m Si014400m Si014400m Si023062m Si023062m Si018417m Si018417m Si017316m Si017316m Si012525m Si012525m Si003071m Si003071m Si010697m Si010697m
"Si014400m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si014400mUncharacterized protein (231 aa)    
Predicted Functional Partners:
Si017316m
Succinyl-CoA ligase subunit beta (422 aa)
       
      0.506
Si012525m
Ribonuclease ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (455 aa)
           
  0.442
Si010697m
Ribonuclease ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (301 aa)
           
  0.442
Si037804m
Uncharacterized protein (167 aa)
       
      0.414
Si033774m
Uncharacterized protein (161 aa)
       
      0.414
Si023318m
Uncharacterized protein (194 aa)
       
      0.414
Si023062m
Uncharacterized protein (248 aa)
       
      0.414
Si018417m
Uncharacterized protein (192 aa)
       
      0.414
Si003071m
Uncharacterized protein (181 aa)
       
      0.414
Si021485m
UTP--ammonia ligase ; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (618 aa)
           
  0.412
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
Server load: low (1%)