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Si014536m Si014536m Si030996m Si030996m Si022971m Si022971m Si022999m Si022999m Si031425m Si031425m Si030555m Si030555m Si011236m Si011236m Si003194m Si003194m Si018593m Si018593m Si019535m Si019535m rpoA rpoA
"Si014536m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si014536mUncharacterized protein (171 aa)    
Predicted Functional Partners:
rpoA
RNA polymerase alpha subunit (261 aa)
   
  0.999
Si022971m
40S ribosomal protein S4 (265 aa)
 
  0.998
Si022999m
40S ribosomal protein S4 (262 aa)
 
  0.998
Si018593m
Uncharacterized protein (151 aa)
   
  0.998
Si011236m
Uncharacterized protein (152 aa)
   
  0.998
Si003194m
Uncharacterized protein (157 aa)
   
  0.998
Si031425m
Uncharacterized protein (145 aa)
   
  0.998
Si030996m
Uncharacterized protein (232 aa)
   
  0.998
Si030555m
60S acidic ribosomal protein P0 ; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (319 aa)
   
  0.998
Si019535m
Uncharacterized protein (145 aa)
   
  0.998
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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