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Si019265m Si019265m Si010654m Si010654m Si034531m Si034531m Si012562m Si012562m Si035088m Si035088m Si034285m Si034285m Si014968m Si014968m Si020232m Si020232m Si018416m Si018416m Si016091m Si016091m Si005851m Si005851m
"Si014968m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si014968mUncharacterized protein (347 aa)    
Predicted Functional Partners:
Si020232m
Uncharacterized protein (216 aa)
       
 
  0.542
Si018416m
Uncharacterized protein (192 aa)
       
      0.541
Si035088m
Uncharacterized protein (536 aa)
     
   
  0.509
Si034531m
Uncharacterized protein (681 aa)
     
   
  0.509
Si005851m
Urea amidohydrolase (841 aa)
           
  0.477
Si034285m
Uncharacterized protein (813 aa)
           
  0.465
Si019265m
Uncharacterized protein (584 aa)
           
  0.465
Si016091m
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1480 aa)
           
  0.429
Si012562m
Uncharacterized protein (332 aa)
           
  0.418
Si010654m
Uncharacterized protein (311 aa)
           
  0.418
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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