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Si024082m Si024082m Si038138m Si038138m Si009550m Si009550m Si000616m Si000616m Si024018m Si024018m Si035354m Si035354m Si011254m Si011254m Si023724m Si023724m Si015123m Si015123m Si009618m Si009618m Si039581m Si039581m
"Si015123m" - Pectinesterase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si015123mPectinesterase (398 aa)    
Predicted Functional Partners:
Si038138m
Uncharacterized protein (109 aa)
           
  0.495
Si035354m
Uncharacterized protein (495 aa)
           
  0.495
Si024082m
Uncharacterized protein (651 aa)
           
  0.495
Si023724m
Uncharacterized protein (106 aa)
           
  0.495
Si009618m
Uncharacterized protein (622 aa)
           
  0.495
Si009550m
Uncharacterized protein (668 aa)
           
  0.495
Si000616m
Uncharacterized protein (648 aa)
           
  0.495
Si024018m
Uncharacterized protein (47 aa)
           
  0.489
Si011254m
Uncharacterized protein (146 aa)
           
  0.467
Si039581m
Uncharacterized protein (412 aa)
       
  0.462
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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