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Si040222m Si040222m Si013115m Si013115m Si028000m Si028000m Si029140m Si029140m Si038058m Si038058m Si015379m Si015379m Si009169m Si009169m Si036267m Si036267m Si005660m Si005660m Si016066m Si016066m Si013247m Si013247m
"Si015379m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si015379mUncharacterized protein (240 aa)    
Predicted Functional Partners:
Si038058m
Uncharacterized protein (121 aa)
       
  0.967
Si029140m
Uncharacterized protein (672 aa)
     
    0.735
Si005660m
Uncharacterized protein (2539 aa)
       
    0.706
Si016066m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (2050 aa)
     
  0.675
Si009169m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1546 aa)
     
  0.675
Si040222m
Uncharacterized protein (80 aa)
       
  0.667
Si036267m
Uncharacterized protein (368 aa)
       
  0.666
Si028000m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1843 aa)
       
  0.661
Si013247m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (860 aa)
       
  0.661
Si013115m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1852 aa)
       
  0.661
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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