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Si039047m Si039047m Si001993m Si001993m Si033890m Si033890m Si033879m Si033879m Si028691m Si028691m Si015397m Si015397m Si016091m Si016091m Si021001m Si021001m Si000800m Si000800m Si016777m Si016777m Si004242m Si004242m
"Si015397m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si015397mUncharacterized protein (757 aa)    
Predicted Functional Partners:
Si033890m
Uncharacterized protein (1480 aa)
   
  0.722
Si033879m
Uncharacterized protein (1564 aa)
   
  0.722
Si039047m
Cytosine-specific methyltransferase (1493 aa)
   
  0.609
Si028691m
Cytosine-specific methyltransferase (1377 aa)
   
  0.609
Si021001m
Uncharacterized protein (1274 aa)
   
  0.609
Si001993m
Uncharacterized protein (358 aa)
   
  0.609
Si016777m
Uncharacterized protein (569 aa)
     
        0.574
Si016091m
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1480 aa)
     
      0.554
Si004242m
Uncharacterized protein (392 aa)
     
        0.431
Si000800m
Uncharacterized protein (584 aa)
     
        0.431
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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