Full Link:
STRINGSTRING
Si040154m Si040154m Si039580m Si039580m Si036641m Si036641m Si039948m Si039948m Si033284m Si033284m Si015477m Si015477m Si033007m Si033007m Si015000m Si015000m Si039641m Si039641m Si006292m Si006292m Si029722m Si029722m
"Si015477m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si015477mUncharacterized protein (396 aa)    
Predicted Functional Partners:
Si015000m
Pectinesterase (245 aa)
       
  0.650
Si039948m
Uncharacterized protein (546 aa)
         
  0.574
Si039641m
Uncharacterized protein (566 aa)
         
  0.574
Si029722m
Uncharacterized protein (472 aa)
     
   
  0.518
Si006292m
Uncharacterized protein (499 aa)
     
   
  0.518
Si033007m
Uncharacterized protein (136 aa)
           
  0.468
Si040154m
Pectinesterase (585 aa)
       
  0.462
Si039580m
Pectinesterase (328 aa)
       
  0.462
Si036641m
Pectinesterase (322 aa)
       
  0.462
Si033284m
Pectinesterase ; Acts in the modification of cell walls via demethylesterification of cell wall pectin (304 aa)
       
  0.462
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
Server load: low (1%)