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Si006979m Si006979m Si033396m Si033396m Si030661m Si030661m Si035657m Si035657m Si009658m Si009658m Si013521m Si013521m Si022881m Si022881m Si020905m Si020905m Si015660m Si015660m Si002470m Si002470m Si011720m Si011720m
"Si015660m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si015660mUncharacterized protein (514 aa)    
Predicted Functional Partners:
Si009658m
Uncharacterized protein (596 aa)
         
0.901
Si035657m
Uncharacterized protein (451 aa)
         
    0.900
Si013521m
Uncharacterized protein (544 aa)
         
 
0.900
Si033396m
Alkyl transferase (307 aa)
         
  0.801
Si030661m
Alkyl transferase (298 aa)
         
  0.801
Si022881m
Alkyl transferase (284 aa)
         
  0.801
Si020905m
Alkyl transferase (268 aa)
         
  0.801
Si011720m
Alkyl transferase (275 aa)
         
  0.801
Si006979m
Alkyl transferase (303 aa)
         
  0.801
Si002470m
Alkyl transferase (287 aa)
         
  0.801
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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