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Si021650m Si021650m Si015928m Si015928m Si021007m Si021007m Si020986m Si020986m Si025836m Si025836m Si013355m Si013355m Si015236m Si015236m Si028658m Si028658m Si009508m Si009508m Si000148m Si000148m Si016091m Si016091m
"Si015928m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si015928mUncharacterized protein (402 aa)    
Predicted Functional Partners:
Si020986m
Structural maintenance of chromosomes protein (1308 aa)
   
0.994
Si025836m
Uncharacterized protein (1153 aa)
     
  0.990
Si021650m
Uncharacterized protein (555 aa)
     
  0.969
Si015236m
Uncharacterized protein (269 aa)
     
  0.969
Si013355m
Uncharacterized protein (686 aa)
     
  0.969
Si009508m
Uncharacterized protein (701 aa)
     
  0.969
Si000148m
Uncharacterized protein (1049 aa)
     
  0.969
Si028658m
Uncharacterized protein (1700 aa)
     
  0.956
Si021007m
Structural maintenance of chromosomes protein (1243 aa)
   
 
0.956
Si016091m
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1480 aa)
     
 
  0.954
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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