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Si040145m Si040145m Si039628m Si039628m Si000306m Si000306m Si013119m Si013119m Si000006m Si000006m Si034019m Si034019m Si020943m Si020943m Si016056m Si016056m Si020982m Si020982m Si039896m Si039896m Si007052m Si007052m
"Si016056m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si016056mUncharacterized protein (2672 aa)    
Predicted Functional Partners:
Si020943m
Uncharacterized protein (2158 aa)
     
        0.615
Si000006m
Uncharacterized protein (2163 aa)
     
        0.615
Si020982m
Uncharacterized protein (1332 aa)
     
        0.575
Si013119m
Uncharacterized protein (1502 aa)
     
        0.575
Si034019m
Alpha-1,4 glucan phosphorylase ; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (1075 aa)
       
      0.552
Si000306m
Alpha-1,4 glucan phosphorylase ; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (837 aa)
       
      0.552
Si039628m
Histone H2A (359 aa)
     
      0.530
Si007052m
Proteasome subunit beta type ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (280 aa)
       
      0.530
Si040145m
Uncharacterized protein (153 aa)
     
      0.529
Si039896m
Uncharacterized protein (201 aa)
     
      0.529
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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