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Si033824m Si033824m Si033950m Si033950m Si009891m Si009891m Si029547m Si029547m Si029217m Si029217m Si016077m Si016077m Si034774m Si034774m Si016994m Si016994m Si007025m Si007025m Si010193m Si010193m Si010740m Si010740m
"Si016077m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si016077mUncharacterized protein (1767 aa)    
Predicted Functional Partners:
Si033824m
Uncharacterized protein (5181 aa)
     
      0.823
Si034774m
Uncharacterized protein (604 aa)
     
 
  0.727
Si029547m
Uncharacterized protein (510 aa)
     
 
  0.727
Si029217m
Uncharacterized protein (623 aa)
     
 
  0.727
Si016994m
Uncharacterized protein (499 aa)
     
 
  0.727
Si010193m
Uncharacterized protein (424 aa)
     
 
  0.727
Si009891m
Uncharacterized protein (508 aa)
     
 
  0.727
Si010740m
Eukaryotic translation initiation factor 3 subunit 4 ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. This subunit can bind 18S rRNA (292 aa)
       
  0.676
Si007025m
Eukaryotic translation initiation factor 3 subunit 4 ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. This subunit can bind 18S rRNA (291 aa)
       
  0.676
Si033950m
DNA-directed RNA polymerase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1226 aa)
     
      0.608
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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