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Si011911m Si011911m Si022847m Si022847m Si016908m Si016908m Si016078m Si016078m Si007225m Si007225m Si013709m Si013709m Si013653m Si013653m Si029595m Si029595m Si022152m Si022152m Si011991m Si011991m Si012515m Si012515m
"Si016078m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si016078mUncharacterized protein (1722 aa)    
Predicted Functional Partners:
Si029595m
Uridine kinase (499 aa)
       
  0.719
Si022847m
Uncharacterized protein (291 aa)
       
  0.719
Si022152m
Uncharacterized protein (420 aa)
       
  0.719
Si013653m
Uridine kinase (484 aa)
       
  0.719
Si012515m
Uncharacterized protein (408 aa)
       
  0.719
Si011991m
Uncharacterized protein (68 aa)
       
  0.719
Si011911m
Uncharacterized protein (614 aa)
       
  0.719
Si007225m
Uncharacterized protein (227 aa)
       
  0.719
Si016908m
Uncharacterized protein (522 aa)
     
  0.709
Si013709m
Histone deacetylase (458 aa)
     
  0.709
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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