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Si009244m Si009244m Si034108m Si034108m Si033853m Si033853m Si033906m Si033906m Si040253m Si040253m Si039134m Si039134m Si009168m Si009168m Si000027m Si000027m Si009649m Si009649m Si016153m Si016153m Si018219m Si018219m
"Si016153m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si016153mUncharacterized protein (1123 aa)    
Predicted Functional Partners:
Si033906m
Uncharacterized protein (1386 aa)
     
 
  0.832
Si039134m
Uncharacterized protein (1593 aa)
     
 
  0.812
Si000027m
Uncharacterized protein (1623 aa)
     
 
  0.812
Si033853m
Uncharacterized protein (1933 aa)
     
 
  0.798
Si009649m
Uncharacterized protein (599 aa)
     
 
  0.689
Si009168m
Uncharacterized protein (1558 aa)
     
 
  0.658
Si034108m
Uncharacterized protein (953 aa)
       
  0.561
Si018219m
Uncharacterized protein (241 aa)
           
  0.546
Si009244m
Uncharacterized protein (1024 aa)
     
   
  0.541
Si040253m
Uncharacterized protein (1030 aa)
     
   
  0.511
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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