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Si013547m Si013547m Si036365m Si036365m MDEH MDEH Si022574m Si022574m Si030117m Si030117m Si036550m Si036550m Si002110m Si002110m Si000006m Si000006m Si022252m Si022252m Si020943m Si020943m PPC1 PPC1
"PPC1" - C3 phosphoenolpyruvate carboxylase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPC1C3 phosphoenolpyruvate carboxylase (965 aa)    
Predicted Functional Partners:
Si020943m
Uncharacterized protein (2158 aa)
     
 
  0.963
Si000006m
Uncharacterized protein (2163 aa)
     
 
  0.963
Si036365m
Malate dehydrogenase (355 aa)
         
  0.960
MDEH
Malate dehydrogenase, glyoxysomal (363 aa)
         
  0.960
Si030117m
Malate dehydrogenase (390 aa)
     
 
  0.959
Si022252m
Malate dehydrogenase (397 aa)
     
 
  0.959
Si013547m
Uncharacterized protein (529 aa)
     
 
  0.959
Si036550m
Malate dehydrogenase (332 aa)
         
  0.959
Si022574m
Malate dehydrogenase (341 aa)
         
  0.959
Si002110m
Malate dehydrogenase (340 aa)
         
  0.959
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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