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Si034781m Si034781m Si034881m Si034881m Si021231m Si021231m Si034563m Si034563m Si034692m Si034692m Si021072m Si021072m Si034681m Si034681m Si021267m Si021267m Si034247m Si034247m Si016318m Si016318m Si022362m Si022362m
"Si016318m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si016318mUncharacterized protein (821 aa)    
Predicted Functional Partners:
Si034692m
Pescadillo homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (626 aa)
     
 
  0.983
Si021267m
Uncharacterized protein (790 aa)
   
 
0.975
Si034681m
Uncharacterized protein (629 aa)
   
 
0.974
Si021231m
2’-O-ribose RNA methyltransferase SPB1 homolog ; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (822 aa)
     
 
  0.973
Si021072m
Uncharacterized protein (1024 aa)
     
      0.973
Si034247m
Uncharacterized protein (842 aa)
     
      0.969
Si034563m
Uncharacterized protein (666 aa)
     
      0.967
Si034881m
Uncharacterized protein (578 aa)
   
 
  0.964
Si034781m
Uncharacterized protein (602 aa)
   
 
  0.964
Si022362m
Uncharacterized protein (379 aa)
   
 
  0.964
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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