Full Link:
STRINGSTRING
Si013313m Si013313m Si000453m Si000453m Si033895m Si033895m Si033896m Si033896m Si016324m Si016324m Si016091m Si016091m Si000061m Si000061m Si016384m Si016384m
"Si016324m" - Chloride channel protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si016324mChloride channel protein (811 aa)    
Predicted Functional Partners:
Si016384m
Chloride channel protein (770 aa)
     
 
  0.544
Si013313m
Chloride channel protein (747 aa)
     
 
  0.544
Si000453m
Chloride channel protein (729 aa)
     
 
  0.544
Si033896m
Uncharacterized protein (1418 aa)
         
  0.508
Si033895m
Uncharacterized protein (1418 aa)
         
  0.508
Si000061m
Uncharacterized protein (1340 aa)
         
  0.508
Si016091m
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1480 aa)
         
  0.449
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
Server load: low (1%)