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Si009366m Si009366m Si038686m Si038686m Si026813m Si026813m Si026138m Si026138m Si021178m Si021178m Si016384m Si016384m Si016324m Si016324m Si003991m Si003991m Si013374m Si013374m Si012785m Si012785m Si009381m Si009381m
"Si016384m" - Chloride channel protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si016384mChloride channel protein (770 aa)    
Predicted Functional Partners:
Si013374m
Uncharacterized protein (669 aa)
           
  0.579
Si012785m
Uncharacterized protein (678 aa)
           
  0.579
Si038686m
Chloride channel protein (679 aa)
     
 
  0.570
Si026813m
Uncharacterized protein (231 aa)
     
 
  0.544
Si026138m
Chloride channel protein (597 aa)
     
 
  0.544
Si021178m
Uncharacterized protein (876 aa)
     
 
  0.544
Si016324m
Chloride channel protein (811 aa)
     
 
  0.544
Si009381m
Uncharacterized protein (803 aa)
     
 
  0.544
Si009366m
Chloride channel protein (820 aa)
     
 
  0.544
Si003991m
Chloride channel protein (788 aa)
     
 
  0.544
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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