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Si013531m Si013531m Si039879m Si039879m Si034868m Si034868m Si035031m Si035031m Si001126m Si001126m Si034944m Si034944m Si016467m Si016467m Si034892m Si034892m Si006172m Si006172m Si016767m Si016767m Si016817m Si016817m
"Si016467m" - Phenylalanine ammonia-lyase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si016467mPhenylalanine ammonia-lyase (718 aa)    
Predicted Functional Partners:
Si016817m
Uncharacterized protein (551 aa)
   
 
  0.949
Si001126m
Uncharacterized protein (505 aa)
     
 
  0.946
Si006172m
Uncharacterized protein (554 aa)
   
 
  0.942
Si013531m
Uncharacterized protein (540 aa)
   
 
  0.936
Si016767m
Uncharacterized protein (573 aa)
   
 
  0.934
Si039879m
Uncharacterized protein (550 aa)
       
  0.934
Si035031m
Uncharacterized protein (546 aa)
       
  0.934
Si034944m
Uncharacterized protein (564 aa)
       
  0.934
Si034892m
Uncharacterized protein (575 aa)
       
  0.934
Si034868m
Uncharacterized protein (579 aa)
       
  0.934
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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