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Si008072m Si008072m Si038989m Si038989m Si035773m Si035773m Si035100m Si035100m Si032454m Si032454m Si016567m Si016567m Si031200m Si031200m Si001126m Si001126m Si020125m Si020125m Si013734m Si013734m Si010065m Si010065m
"Si016567m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si016567mUncharacterized protein (672 aa)    
Predicted Functional Partners:
Si032454m
Uncharacterized protein (379 aa)
   
     
  0.664
Si031200m
Uncharacterized protein (189 aa)
   
     
  0.662
Si010065m
Uncharacterized protein (455 aa)
   
     
  0.659
Si001126m
Uncharacterized protein (505 aa)
   
     
  0.659
Si008072m
Uncharacterized protein (522 aa)
   
     
  0.656
Si038989m
Uncharacterized protein (440 aa)
   
     
  0.651
Si035100m
Uncharacterized protein (534 aa)
     
 
  0.649
Si035773m
Uncharacterized protein (435 aa)
   
     
  0.647
Si013734m
Uncharacterized protein (447 aa)
   
     
  0.624
Si020125m
Uncharacterized protein (168 aa)
   
     
  0.615
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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