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Si008382m Si008382m Si001501m Si001501m Si016607m Si016607m Si010060m Si010060m Si012545m Si012545m Si012642m Si012642m
"Si016607m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si016607mUncharacterized protein (647 aa)    
Predicted Functional Partners:
Si012545m
Uncharacterized protein (438 aa)
           
  0.485
Si001501m
Uncharacterized protein (436 aa)
           
  0.485
Si012642m
Uncharacterized protein (415 aa)
           
  0.410
Si010060m
Uncharacterized protein (457 aa)
           
  0.410
Si008382m
Uncharacterized protein (399 aa)
           
  0.410
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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