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Si010312m Si010312m Si026480m Si026480m Si006520m Si006520m Si016641m Si016641m Si024795m Si024795m Si022207m Si022207m Si035674m Si035674m Si014251m Si014251m
"Si016641m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si016641mUncharacterized protein (625 aa)    
Predicted Functional Partners:
Si035674m
Uncharacterized protein (449 aa)
   
          0.518
Si022207m
Uncharacterized protein (406 aa)
           
  0.475
Si006520m
Uncharacterized protein (421 aa)
           
  0.475
Si026480m
Fructose-bisphosphate aldolase (389 aa)
           
  0.465
Si010312m
Fructose-bisphosphate aldolase (388 aa)
           
  0.465
Si024795m
Uncharacterized protein (398 aa)
           
  0.418
Si014251m
Uncharacterized protein (272 aa)
   
          0.404
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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