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Si016177m Si016177m Si000117m Si000117m Si016642m Si016642m Si021061m Si021061m Si029313m Si029313m Si031967m Si031967m
"Si016642m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si016642mUncharacterized protein (625 aa)    
Predicted Functional Partners:
Si000117m
Uncharacterized protein (1117 aa)
       
 
0.878
Si029313m
Uncharacterized protein (584 aa)
       
 
  0.744
Si016177m
Uncharacterized protein (1051 aa)
     
 
0.563
Si021061m
Uncharacterized protein (1045 aa)
     
 
0.563
Si031967m
Uncharacterized protein (1021 aa)
     
   
0.563
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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