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Si021163m Si021163m Si032139m Si032139m Si000012m Si000012m Si022999m Si022999m Si000227m Si000227m Si030288m Si030288m Si016707m Si016707m Si017923m Si017923m Si017895m Si017895m Si035915m Si035915m Si017281m Si017281m
"Si016707m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si016707mUncharacterized protein (596 aa)    
Predicted Functional Partners:
Si000012m
Uncharacterized protein (2001 aa)
     
      0.666
Si017281m
Uncharacterized protein (427 aa)
     
      0.651
Si000227m
Uncharacterized protein (921 aa)
     
      0.651
Si035915m
Uncharacterized protein (410 aa)
       
      0.651
Si032139m
Uncharacterized protein (487 aa)
     
      0.572
Si021163m
Uncharacterized protein (891 aa)
     
      0.572
Si017895m
Uncharacterized protein (306 aa)
     
      0.565
Si030288m
Uncharacterized protein (357 aa)
     
      0.547
Si017923m
Uncharacterized protein (300 aa)
     
      0.547
Si022999m
40S ribosomal protein S4 (262 aa)
     
      0.507
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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