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Si035107m Si035107m Si004538m Si004538m Si001673m Si001673m Si016776m Si016776m Si034298m Si034298m Si000006m Si000006m Si034790m Si034790m Si016336m Si016336m Si016174m Si016174m Si010847m Si010847m Si009573m Si009573m
"Si016776m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si016776mUncharacterized protein (571 aa)    
Predicted Functional Partners:
Si034298m
Uncharacterized protein (807 aa)
   
  0.996
Si016336m
Uncharacterized protein (805 aa)
   
  0.996
Si035107m
Glutamyl-tRNA reductase (533 aa)
     
 
  0.945
Si000006m
Uncharacterized protein (2163 aa)
     
 
  0.935
Si034790m
Uncharacterized protein (600 aa)
   
  0.929
Si010847m
Uncharacterized protein (266 aa)
   
  0.906
Si001673m
Uncharacterized protein (407 aa)
   
  0.906
Si009573m
Uncharacterized protein (656 aa)
   
  0.885
Si004538m
Uncharacterized protein (142 aa)
   
  0.885
Si016174m
Uncharacterized protein (1058 aa)
   
  0.870
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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