Full Link:
close STRING Website Improvement Campaign
deny allow Over the next 24 hours, we are collecting usage information on the web-interface (learn more).   Do you allow anonymous tracking of your activity ?
STRINGSTRING
Si016071m Si016071m Si009854m Si009854m Si036726m Si036726m Si004058m Si004058m Si016969m Si016969m Si018526m Si018526m Si009778m Si009778m Si002080m Si002080m Si011190m Si011190m Si009750m Si009750m Si011191m Si011191m
"Si016969m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si016969mUncharacterized protein (503 aa)    
Predicted Functional Partners:
Si036726m
Protein BCCIP homolog (313 aa)
     
      0.544
Si004058m
Uncharacterized protein (173 aa)
       
 
  0.489
Si002080m
Uncharacterized protein (344 aa)
           
  0.468
Si016071m
Uncharacterized protein (1884 aa)
     
   
  0.453
Si009854m
Uncharacterized protein (517 aa)
     
   
  0.453
Si018526m
Uncharacterized protein (166 aa)
     
 
  0.448
Si011191m
Annotation not available (166 aa)
     
 
  0.448
Si011190m
Annotation not available (166 aa)
     
 
  0.448
Si009778m
Uncharacterized protein (538 aa)
     
        0.422
Si009750m
Uncharacterized protein (555 aa)
     
        0.422
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
Server load: low (3%)