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Si013547m Si013547m Si035666m Si035666m Si022574m Si022574m Si036365m Si036365m MDEH MDEH Si030117m Si030117m Si017002m Si017002m Si034082m Si034082m Si002110m Si002110m Si022252m Si022252m Si013192m Si013192m
"Si017002m" - Citrate synthase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si017002mCitrate synthase (498 aa)    
Predicted Functional Partners:
Si036365m
Malate dehydrogenase (355 aa)
   
  0.987
Si030117m
Malate dehydrogenase (390 aa)
   
  0.987
Si022574m
Malate dehydrogenase (341 aa)
   
  0.987
MDEH
Malate dehydrogenase, glyoxysomal (363 aa)
   
  0.987
Si022252m
Malate dehydrogenase (397 aa)
   
  0.987
Si013547m
Uncharacterized protein (529 aa)
   
  0.987
Si002110m
Malate dehydrogenase (340 aa)
   
  0.987
Si034082m
Aconitate hydratase ; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (986 aa)
   
  0.984
Si013192m
Aconitate hydratase ; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (983 aa)
   
  0.984
Si035666m
Acetyltransferase component of pyruvate dehydrogenase complex ; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (450 aa)
   
  0.983
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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