Full Link:
STRINGSTRING
Si038243m Si038243m Si037249m Si037249m Si017009m Si017009m Si040270m Si040270m rpoA rpoA Si020882m Si020882m Si020876m Si020876m Si020827m Si020827m Si011744m Si011744m Si020755m Si020755m Si007039m Si007039m
"Si017009m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si017009mUncharacterized protein (496 aa)    
Predicted Functional Partners:
rpoA
RNA polymerase alpha subunit (261 aa)
       
 
  0.590
Si007039m
Uncharacterized protein (285 aa)
       
 
  0.590
Si020827m
ATP-dependent Clp protease proteolytic subunit (166 aa)
     
 
  0.561
Si038243m
Uncharacterized protein (90 aa)
         
  0.553
Si020755m
Uncharacterized protein (248 aa)
         
  0.553
Si011744m
Uncharacterized protein (116 aa)
         
  0.553
Si020876m
Uncharacterized protein (876 aa)
     
   
  0.497
Si040270m
Uncharacterized protein (309 aa)
         
  0.496
Si037249m
Uncharacterized protein (240 aa)
         
  0.496
Si020882m
Uncharacterized protein (443 aa)
         
  0.496
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
Server load: low (1%)