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Si037685m Si037685m Si030743m Si030743m Si037006m Si037006m Si039107m Si039107m rpoA rpoA Si038035m Si038035m Si017119m Si017119m Si007510m Si007510m Si016942m Si016942m Si013827m Si013827m Si021092m Si021092m
"Si017119m" - Elongation factor Tu in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si017119mElongation factor Tu ; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (467 aa)    
Predicted Functional Partners:
rpoA
RNA polymerase alpha subunit (261 aa)
   
  0.984
Si039107m
Uncharacterized protein (272 aa)
 
  0.974
Si016942m
Uncharacterized protein (512 aa)
   
  0.972
Si037685m
Uncharacterized protein (183 aa)
 
  0.969
Si037006m
Uncharacterized protein (273 aa)
   
  0.969
Si030743m
Uncharacterized protein (279 aa)
   
  0.969
Si021092m
Elongation factor Ts ; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (988 aa)
   
  0.968
Si013827m
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial ; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (415 aa)
   
  0.965
Si038035m
Uncharacterized protein (126 aa)
   
  0.963
Si007510m
Uncharacterized protein (129 aa)
   
  0.963
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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