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Si002952m Si002952m Si023263m Si023263m Si020958m Si020958m Si023140m Si023140m Si016986m Si016986m Si017252m Si017252m Si002943m Si002943m Si002953m Si002953m Si003052m Si003052m Si020854m Si020854m Si011145m Si011145m
"Si017252m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si017252mUncharacterized protein (432 aa)    
Predicted Functional Partners:
Si020854m
Uncharacterized protein (461 aa)
       
      0.885
Si023263m
Uncharacterized protein (206 aa)
     
 
  0.725
Si023140m
Uncharacterized protein (231 aa)
     
 
  0.725
Si002953m
Uncharacterized protein (206 aa)
     
 
  0.725
Si002952m
Uncharacterized protein (206 aa)
     
 
  0.725
Si002943m
Uncharacterized protein (207 aa)
     
 
  0.725
Si020958m
Uncharacterized protein (1629 aa)
     
 
  0.607
Si011145m
Golgi apparatus membrane protein TVP23 ; Golgi membrane protein involved in vesicular trafficking (183 aa)
     
      0.555
Si003052m
Golgi apparatus membrane protein TVP23 ; Golgi membrane protein involved in vesicular trafficking (184 aa)
     
      0.555
Si016986m
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (501 aa)
     
 
  0.544
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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