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Si035704m Si035704m Si006625m Si006625m Si036161m Si036161m Si017273m Si017273m Si030815m Si030815m Si006566m Si006566m Si026640m Si026640m Si022093m Si022093m Si030175m Si030175m Si001554m Si001554m Si017909m Si017909m
"Si017273m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si017273mUncharacterized protein (428 aa)    
Predicted Functional Partners:
Si006566m
Uncharacterized protein (408 aa)
   
          0.526
Si026640m
Uncharacterized protein (322 aa)
   
          0.524
Si035704m
Uncharacterized protein (445 aa)
   
          0.522
Si001554m
Uncharacterized protein (426 aa)
   
          0.520
Si036161m
Uncharacterized protein (380 aa)
   
          0.518
Si030175m
Uncharacterized protein (380 aa)
   
          0.518
Si017909m
Uncharacterized protein (303 aa)
   
          0.518
Si030815m
Uncharacterized protein (267 aa)
   
          0.516
Si022093m
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (435 aa)
   
          0.515
Si006625m
Uncharacterized protein (390 aa)
   
          0.515
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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