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Si006233m Si006233m Si017283m Si017283m Si034946m Si034946m Si034983m Si034983m Si005911m Si005911m Si008087m Si008087m Si034019m Si034019m Si016350m Si016350m Si000306m Si000306m Si009312m Si009312m Si011852m Si011852m
"Si017283m" - Alpha-amylase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si017283mAlpha-amylase (427 aa)    
Predicted Functional Partners:
Si034019m
Alpha-1,4 glucan phosphorylase ; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (1075 aa)
   
  0.974
Si000306m
Alpha-1,4 glucan phosphorylase ; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (837 aa)
   
  0.974
Si016350m
Uncharacterized protein (797 aa)
   
 
  0.964
Si009312m
Uncharacterized protein (905 aa)
   
 
  0.964
Si008087m
Uncharacterized protein (692 aa)
   
 
  0.964
Si005911m
Uncharacterized protein (762 aa)
   
 
  0.964
Si034946m
Beta-amylase (563 aa)
         
  0.902
Si034983m
Beta-amylase (557 aa)
         
  0.902
Si006233m
Uncharacterized protein (526 aa)
       
 
  0.758
Si011852m
Uncharacterized protein (554 aa)
 
 
  0.738
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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