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Si031033m Si031033m Si030780m Si030780m Si035707m Si035707m Si036994m Si036994m Si023466m Si023466m Si017390m Si017390m Si019771m Si019771m Si023465m Si023465m Si023462m Si023462m Si023437m Si023437m Si020845m Si020845m
"Si017390m" - Phosphoribulokinase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Experiments
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[Homology]
Score
Si017390mPhosphoribulokinase (403 aa)    
Predicted Functional Partners:
Si036994m
Ribulose-phosphate 3-epimerase (274 aa)
   
 
  0.973
Si031033m
Ribulose-phosphate 3-epimerase (225 aa)
   
 
  0.968
Si020845m
Uncharacterized protein (427 aa)
       
  0.956
Si019771m
Ribulose bisphosphate carboxylase small chain ; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (209 aa)
   
 
  0.952
Si035707m
Glyceraldehyde-3-phosphate dehydrogenase (445 aa)
   
 
  0.941
Si023437m
Ribulose bisphosphate carboxylase small chain ; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (173 aa)
   
 
  0.940
Si023466m
Ribulose bisphosphate carboxylase small chain ; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (168 aa)
   
 
  0.939
Si023465m
Ribulose bisphosphate carboxylase small chain ; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (168 aa)
   
 
  0.939
Si023462m
Ribulose bisphosphate carboxylase small chain ; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (169 aa)
   
 
  0.939
Si030780m
Uncharacterized protein (272 aa)
     
 
  0.937
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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