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Si019116m Si019116m Si035488m Si035488m Si014622m Si014622m Si035483m Si035483m Si017408m Si017408m Si001297m Si001297m Si029493m Si029493m Si017560m Si017560m Si019987m Si019987m Si006560m Si006560m Si002038m Si002038m
"Si017408m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si017408mUncharacterized protein (401 aa)    
Predicted Functional Partners:
Si001297m
Uncharacterized protein (472 aa)
       
 
  0.973
Si002038m
Uncharacterized protein (350 aa)
       
 
  0.777
Si029493m
Uncharacterized protein (521 aa)
       
 
  0.730
Si017560m
Uncharacterized protein (368 aa)
       
 
  0.730
Si014622m
Uncharacterized protein (139 aa)
       
 
  0.730
Si006560m
Uncharacterized protein (410 aa)
       
 
  0.730
Si035488m
Uncharacterized protein (475 aa)
     
  0.627
Si035483m
Uncharacterized protein (475 aa)
     
  0.627
Si019987m
Uncharacterized protein (317 aa)
     
  0.627
Si019116m
Uncharacterized protein (186 aa)
     
  0.627
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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