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Si039047m Si039047m Si033890m Si033890m Si001467m Si001467m Si001401m Si001401m Si017410m Si017410m Si022004m Si022004m Si030459m Si030459m Si040281m Si040281m Si006576m Si006576m Si020398m Si020398m Si033879m Si033879m
"Si017410m" - S-adenosylmethionine decarboxylase proenzyme in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si017410mS-adenosylmethionine decarboxylase proenzyme (400 aa)    
Predicted Functional Partners:
Si030459m
Uncharacterized protein (333 aa)
     
 
  0.961
Si020398m
Uncharacterized protein (386 aa)
     
 
  0.961
Si006576m
Uncharacterized protein (403 aa)
     
 
  0.961
Si022004m
S-adenosylmethionine synthase ; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (455 aa)
     
 
  0.904
Si001467m
S-adenosylmethionine synthase ; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (442 aa)
     
 
  0.904
Si001401m
S-adenosylmethionine synthase ; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (453 aa)
     
 
  0.904
Si033890m
Uncharacterized protein (1480 aa)
         
  0.900
Si033879m
Uncharacterized protein (1564 aa)
         
  0.900
Si040281m
Uncharacterized protein (486 aa)
         
    0.900
Si039047m
Cytosine-specific methyltransferase (1493 aa)
         
    0.900
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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