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Si006335m Si006335m Si035948m Si035948m Si003169m Si003169m Si001296m Si001296m Si017799m Si017799m Si021861m Si021861m Si017488m Si017488m Si018596m Si018596m Si025234m Si025234m Si007431m Si007431m Si011017m Si011017m
"Si017488m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si017488mUncharacterized protein (386 aa)    
Predicted Functional Partners:
Si001296m
Uncharacterized protein (472 aa)
     
      0.938
Si017799m
Uncharacterized protein (323 aa)
     
        0.773
Si035948m
Uncharacterized protein (405 aa)
     
      0.718
Si006335m
Uncharacterized protein (479 aa)
     
      0.718
Si003169m
Uncharacterized protein (161 aa)
     
      0.580
Si021861m
Uncharacterized protein (494 aa)
     
      0.575
Si025234m
Uncharacterized protein (480 aa)
     
        0.414
Si011017m
40S ribosomal protein S8 (221 aa)
   
        0.409
Si018596m
Uncharacterized protein (150 aa)
     
        0.400
Si007431m
Uncharacterized protein (150 aa)
     
        0.400
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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