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Si026908m Si026908m Si031205m Si031205m Si034116m Si034116m Si029128m Si029128m Si006305m Si006305m Si004406m Si004406m Si017602m Si017602m Si002806m Si002806m Si025234m Si025234m Si037165m Si037165m Si010975m Si010975m
"Si017602m" - rRNA adenine N(6)-methyltransferase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si017602mrRNA adenine N(6)-methyltransferase (359 aa)    
Predicted Functional Partners:
Si025234m
Uncharacterized protein (480 aa)
     
 
  0.993
Si002806m
Uncharacterized protein (227 aa)
     
 
  0.990
Si034116m
Uncharacterized protein (938 aa)
     
      0.989
Si004406m
KRR-R motif-containing protein 1 ; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (415 aa)
     
 
  0.983
Si026908m
Uncharacterized protein (183 aa)
   
 
  0.972
Si010975m
Uncharacterized protein (231 aa)
   
 
  0.972
Si006305m
Uncharacterized protein (491 aa)
     
      0.963
Si037165m
Uncharacterized protein (250 aa)
     
   
  0.962
Si031205m
60S ribosome subunit biogenesis protein NIP7 homolog ; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (188 aa)
     
   
  0.962
Si029128m
Ribosome biogenesis protein BOP1 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (680 aa)
     
        0.962
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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