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Si026311m Si026311m Si039584m Si039584m Si016737m Si016737m Si006010m Si006010m Si034692m Si034692m Si013699m Si013699m Si004404m Si004404m Si017863m Si017863m Si013520m Si013520m Si009549m Si009549m Si009993m Si009993m
"Si017863m" - Deoxyhypusine monooxygenase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
Si017863mDeoxyhypusine monooxygenase ; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)- L-lysine intermediate to form hypusine, an essential post- translational modification only found in mature eIF-5A factor (311 aa)    
Predicted Functional Partners:
Si016737m
Uncharacterized protein (584 aa)
     
        0.827
Si039584m
Uncharacterized protein (442 aa)
     
        0.824
Si034692m
Pescadillo homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (626 aa)
     
        0.824
Si026311m
Uncharacterized protein (475 aa)
     
        0.824
Si013520m
Uncharacterized protein (545 aa)
     
        0.824
Si009993m
Uncharacterized protein (478 aa)
     
        0.824
Si009549m
Uncharacterized protein (669 aa)
     
        0.824
Si013699m
Uncharacterized protein (463 aa)
     
        0.812
Si006010m
Nucleolar GTP-binding protein 1 ; Involved in the biogenesis of the 60S ribosomal subunit (667 aa)
     
        0.812
Si004404m
Uncharacterized protein (637 aa)
     
        0.812
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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