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Si033950m Si033950m Si013128m Si013128m Si027786m Si027786m Si027050m Si027050m Si031392m Si031392m Si011537m Si011537m Si035982m Si035982m Si020876m Si020876m Si009201m Si009201m Si017902m Si017902m Si016464m Si016464m
"Si017902m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si017902mUncharacterized protein (304 aa)    
Predicted Functional Partners:
Si035982m
Uncharacterized protein (401 aa)
   
 
0.978
Si031392m
Uncharacterized protein (150 aa)
     
      0.734
Si033950m
DNA-directed RNA polymerase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1226 aa)
       
 
  0.675
Si020876m
Uncharacterized protein (876 aa)
       
 
  0.675
Si013128m
DNA-directed RNA polymerase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1257 aa)
       
 
  0.675
Si009201m
DNA-directed RNA polymerase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1234 aa)
       
 
  0.675
Si027050m
Uncharacterized protein (109 aa)
     
 
  0.580
Si011537m
Uncharacterized protein (72 aa)
     
 
  0.580
Si016464m
Uncharacterized protein (719 aa)
     
      0.549
Si027786m
Uncharacterized protein (169 aa)
     
      0.548
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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