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Si013650m Si013650m Si017049m Si017049m Si036636m Si036636m Si017954m Si017954m Si039543m Si039543m Si034226m Si034226m Si029555m Si029555m Si034584m Si034584m Si034736m Si034736m Si032129m Si032129m Si022123m Si022123m
"Si017954m" - ATP-dependent transporter YFL028C in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si017954mATP-dependent transporter YFL028C (294 aa)    
Predicted Functional Partners:
Si036636m
Uncharacterized protein (323 aa)
   
0.870
Si017049m
Adenosylhomocysteinase (485 aa)
       
      0.794
Si013650m
Adenosylhomocysteinase (485 aa)
       
      0.794
Si034226m
Uncharacterized protein (858 aa)
         
  0.503
Si034736m
Uncharacterized protein (616 aa)
       
  0.407
Si034584m
Uncharacterized protein (656 aa)
       
  0.407
Si022123m
Uncharacterized protein (427 aa)
       
  0.407
Si039543m
Uncharacterized protein (325 aa)
         
  0.402
Si032129m
Uncharacterized protein (502 aa)
         
  0.402
Si029555m
Uncharacterized protein (508 aa)
         
  0.402
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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