Full Link:
STRINGSTRING
Si011060m Si011060m Si001992m Si001992m Si018098m Si018098m Si037111m Si037111m Si025130m Si025130m Si017922m Si017922m Si031138m Si031138m
"Si018098m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si018098mUncharacterized protein (267 aa)    
Predicted Functional Partners:
Si037111m
Protein YIPF (258 aa)
     
 
  0.856
Si031138m
Uncharacterized protein (203 aa)
     
 
  0.407
Si025130m
Uncharacterized protein (143 aa)
     
 
  0.407
Si017922m
Uncharacterized protein (300 aa)
     
 
  0.407
Si011060m
Uncharacterized protein (209 aa)
     
 
  0.407
Si001992m
Uncharacterized protein (359 aa)
     
 
  0.407
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
Server load: low (2%)