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Si004598m Si004598m Si034251m Si034251m Si002599m Si002599m Si032049m Si032049m Si024219m Si024219m Si007886m Si007886m Si021595m Si021595m Si018146m Si018146m Si020216m Si020216m Si034254m Si034254m Si000542m Si000542m
"Si018146m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si018146mUncharacterized protein (256 aa)    
Predicted Functional Partners:
Si032049m
Uncharacterized protein (448 aa)
           
  0.589
Si034254m
Uncharacterized protein (839 aa)
           
  0.507
Si034251m
Uncharacterized protein (840 aa)
           
  0.507
Si002599m
Uncharacterized protein (261 aa)
           
  0.489
Si020216m
Uncharacterized protein (310 aa)
           
  0.485
Si024219m
Uncharacterized protein (325 aa)
           
  0.467
Si021595m
Auxin response factor ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (577 aa)
     
   
  0.466
Si004598m
Auxin response factor ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (667 aa)
     
   
  0.466
Si000542m
Auxin response factor ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (685 aa)
     
   
  0.466
Si007886m
Uncharacterized protein (368 aa)
           
  0.459
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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