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Si018591m Si018591m Si021373m Si021373m Si018178m Si018178m Si004004m Si004004m Si014278m Si014278m Si013362m Si013362m Si022078m Si022078m Si000608m Si000608m Si031226m Si031226m Si016445m Si016445m Si002427m Si002427m
"Si018178m" - Defective in cullin neddylation protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si018178mDefective in cullin neddylation protein (250 aa)    
Predicted Functional Partners:
Si031226m
Uncharacterized protein (183 aa)
       
 
  0.862
Si014278m
Uncharacterized protein (265 aa)
       
 
  0.862
Si022078m
Uncharacterized protein (439 aa)
     
 
  0.843
Si021373m
Uncharacterized protein (693 aa)
     
 
  0.747
Si018591m
Uncharacterized protein (152 aa)
     
 
  0.747
Si016445m
Uncharacterized protein (736 aa)
     
 
  0.747
Si013362m
Uncharacterized protein (674 aa)
     
 
  0.747
Si004004m
Uncharacterized protein (726 aa)
     
 
  0.747
Si002427m
Uncharacterized protein (294 aa)
     
 
  0.747
Si000608m
Uncharacterized protein (652 aa)
     
 
  0.747
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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