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Si022214m Si022214m Si026107m Si026107m Si009603m Si009603m Si018190m Si018190m Si020943m Si020943m Si019533m Si019533m Si001950m Si001950m Si016949m Si016949m Si000006m Si000006m Si017536m Si017536m Si010358m Si010358m
"Si018190m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si018190mUncharacterized protein (247 aa)    
Predicted Functional Partners:
Si016949m
Uncharacterized protein (509 aa)
 
  0.995
Si022214m
3-isopropylmalate dehydrogenase ; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (405 aa)
 
  0.992
Si009603m
Uncharacterized protein (631 aa)
 
 
  0.980
Si026107m
Uncharacterized protein (635 aa)
 
 
  0.980
Si010358m
Uncharacterized protein (377 aa)
 
  0.903
Si001950m
Isocitrate dehydrogenase [NAD] subunit, mitochondrial (365 aa)
 
  0.902
Si017536m
Uncharacterized protein (375 aa)
 
  0.902
Si020943m
Uncharacterized protein (2158 aa)
   
 
  0.829
Si000006m
Uncharacterized protein (2163 aa)
   
 
  0.829
Si019533m
L-lactate dehydrogenase (352 aa)
       
  0.825
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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