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Si038753m Si038753m Si008284m Si008284m Si038593m Si038593m Si027602m Si027602m Si018249m Si018249m Si029038m Si029038m Si033937m Si033937m Si006046m Si006046m Si017237m Si017237m Si013202m Si013202m Si005973m Si005973m
"Si018249m" - Peptidyl-prolyl cis-trans isomerase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si018249mPeptidyl-prolyl cis-trans isomerase ; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (233 aa)    
Predicted Functional Partners:
Si006046m
Uncharacterized protein (637 aa)
     
  0.990
Si033937m
Uncharacterized protein (1291 aa)
     
  0.987
Si027602m
Uncharacterized protein (569 aa)
     
  0.974
Si029038m
Uncharacterized protein (747 aa)
     
  0.929
Si005973m
Uncharacterized protein (697 aa)
     
  0.929
Si038593m
Uncharacterized protein (851 aa)
     
  0.914
Si017237m
Protein CLP1 homolog ; Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3’-end formation (437 aa)
     
  0.905
Si038753m
Uncharacterized protein (235 aa)
     
  0.886
Si008284m
Uncharacterized protein (201 aa)
     
  0.886
Si013202m
Uncharacterized protein (961 aa)
     
  0.810
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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