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Si034849m Si034849m Si034298m Si034298m Si017294m Si017294m Si016336m Si016336m Si006403m Si006403m Si018280m Si018280m Si023229m Si023229m Si031021m Si031021m Si031036m Si031036m Si022275m Si022275m Si002164m Si002164m
"Si018280m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si018280mUncharacterized protein (226 aa)    
Predicted Functional Partners:
Si006403m
Uncharacterized protein (454 aa)
 
 
  0.972
Si017294m
Uncharacterized protein (425 aa)
   
 
  0.963
Si034298m
Uncharacterized protein (807 aa)
     
  0.871
Si016336m
Uncharacterized protein (805 aa)
     
  0.871
Si031036m
Uncharacterized protein (223 aa)
     
  0.819
Si031021m
Uncharacterized protein (228 aa)
     
  0.819
Si023229m
Uncharacterized protein (213 aa)
   
   
 
0.803
Si022275m
Uncharacterized protein (392 aa)
     
        0.707
Si002164m
Uncharacterized protein (334 aa)
     
        0.707
Si034849m
Lysyl-tRNA synthetase (583 aa)
     
    0.615
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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