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Si031026m Si031026m Si026637m Si026637m Si013125m Si013125m Si037454m Si037454m Si028653m Si028653m Si007139m Si007139m Si018318m Si018318m Si029396m Si029396m Si022363m Si022363m Si013117m Si013117m Si017660m Si017660m
"Si018318m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si018318mUncharacterized protein (217 aa)    
Predicted Functional Partners:
Si031026m
Uncharacterized protein (227 aa)
     
 
  0.533
Si029396m
Uncharacterized protein (555 aa)
         
  0.529
Si013125m
Uncharacterized protein (1329 aa)
         
  0.529
Si037454m
Uncharacterized protein (217 aa)
         
  0.516
Si028653m
Uncharacterized protein (1737 aa)
         
  0.483
Si013117m
Uncharacterized protein (1658 aa)
         
  0.483
Si007139m
Uncharacterized protein (254 aa)
       
  0.461
Si022363m
Uncharacterized protein (378 aa)
       
 
  0.422
Si017660m
Uncharacterized protein (350 aa)
       
 
  0.422
Si026637m
HVA22-like protein (323 aa)
           
  0.420
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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