Full Link:
STRINGSTRING
Si034781m Si034781m Si034881m Si034881m Si018328m Si018328m Si035811m Si035811m Si034563m Si034563m Si034436m Si034436m Si013356m Si013356m Si017799m Si017799m Si021323m Si021323m Si029128m Si029128m Si022362m Si022362m
"Si018328m" - Peptidyl-prolyl cis-trans isomerase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si018328mPeptidyl-prolyl cis-trans isomerase (215 aa)    
Predicted Functional Partners:
Si017799m
Uncharacterized protein (323 aa)
     
      0.921
Si029128m
Ribosome biogenesis protein BOP1 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (680 aa)
     
      0.919
Si013356m
Ribosome biogenesis protein BOP1 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (681 aa)
     
      0.919
Si034881m
Uncharacterized protein (578 aa)
     
      0.915
Si034781m
Uncharacterized protein (602 aa)
     
      0.915
Si022362m
Uncharacterized protein (379 aa)
     
      0.915
Si035811m
Uncharacterized protein (428 aa)
     
      0.903
Si021323m
Uncharacterized protein (733 aa)
     
      0.903
Si034563m
Uncharacterized protein (666 aa)
     
      0.886
Si034436m
Uncharacterized protein (725 aa)
     
      0.875
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
Server load: low (2%)